Edwin J Atencio; Howard S Bilofsky; EMBL Data Libraries.;'s Nucleotide Sequences 1986/1987: Structural RNA, Synthetic, PDF

By Edwin J Atencio; Howard S Bilofsky; EMBL Data Libraries.; GenBank

ISBN-10: 0125125178

ISBN-13: 9780125125178

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Extra resources for Nucleotide Sequences 1986/1987: Structural RNA, Synthetic, and Unannotated Sequences. A Compilation from the Genbank® and EMBL Data Libraries

Sample text

T h i s sequence has an unusual two extra nuc l e o t i des between u8 and al6 i t also has an extra unpai red nuc l e o t ide i n the l oop iv stem ( base 77 ) . ser-trna-cmca shows low homo l o gy to mammal ian s e r i ne ( 47-52% 1 or t ryptophan ( 49% ) t rnas . from to description key FEATURES : tRNA 1 90 s e r-t rna-cmca ( nar : 1671 ) SITES : desc r i p t i on s i t e span key s i t e span desc ription key ser-t rna-cmca anti codon cca 3 36 anticdn 1 1 numbered 1 in [ l ] re fnumbr - > tRNA 1 i6a = n6-isopenteny l adenosine 39 modi fied 1 s e r-trna-cmca start 1 f = pseudouridine 68 1 modi fied 6 1 m2g = 2-methyl guanosine modi fied 71 mla 1-me thyl adenosine 1 modi fied 1 d d i hydrour idine 30 modi fied 90 ser-t rna-cmca end 1 tRNA < 36 1 cm 2 ' -o-methylcyt idine modi fied 5 ' end o f mature t rna ORIGI N : = = = RNA-26 BOVTRSUGA SEQUENCE : 90 bp 16 a 26 c 27 g 21 t 1 gcccggatga t c c tcagtgg t c c ggggtgt aggctccaaa c c t gtagctg tc tagcgaca gagtggttca attccac c t t tcgggcgcca BOVTRW : bovine t rp-t rna .

It b i nds to uga and not to o ther codons fo r t ryptophan and serine . t h i s sequence has an unusual two extra nuc l e o t i des between u8 and al6 i t also has an extra unpai red nuc l e o t ide i n the l oop iv stem ( base 77 ) . ser-trna-cmca shows low homo l o gy to mammal ian s e r i ne ( 47-52% 1 or t ryptophan ( 49% ) t rnas . from to description key FEATURES : tRNA 1 90 s e r-t rna-cmca ( nar : 1671 ) SITES : desc r i p t i on s i t e span key s i t e span desc ription key ser-t rna-cmca anti codon cca 3 36 anticdn 1 1 numbered 1 in [ l ] re fnumbr - > tRNA 1 i6a = n6-isopenteny l adenosine 39 modi fied 1 s e r-trna-cmca start 1 f = pseudouridine 68 1 modi fied 6 1 m2g = 2-methyl guanosine modi fied 71 mla 1-me thyl adenosine 1 modi fied 1 d d i hydrour idine 30 modi fied 90 ser-t rna-cmca end 1 tRNA < 36 1 cm 2 ' -o-methylcyt idine modi fied 5 ' end o f mature t rna ORIGI N : = = = RNA-26 BOVTRSUGA SEQUENCE : 90 bp 16 a 26 c 27 g 21 t 1 gcccggatga t c c tcagtgg t c c ggggtgt aggctccaaa c c t gtagctg tc tagcgaca gagtggttca attccac c t t tcgggcgcca BOVTRW : bovine t rp-t rna .

The nucleotide sequence o f two bovine l ens pheny l al anine tRNAs : possible act ivat ion o f a new phenyl alanine tRNA gene during d i f fe rentiation of l ens c e l l s " ; J Biol Chem 255 , 6020-6023 ( 1980 ) KEYWORDS : t ransfer RNA ; t ransfer RNA-Phe . SOURCE : Bovine l ens tRNA . Bos taurus COMMENT : Contr ibuted on tape Apr i l 1983 by M . Spr inzl & D . H . Gauss ; from their entry 1491 in Nuc l Acid Res 1 1 , r l-r54 ( 1983 ) . Also sequenced [ l ] is bovine phe-tRNA-2 . The two sequences di ffer only at base 57 .

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Nucleotide Sequences 1986/1987: Structural RNA, Synthetic, and Unannotated Sequences. A Compilation from the Genbank® and EMBL Data Libraries by Edwin J Atencio; Howard S Bilofsky; EMBL Data Libraries.; GenBank


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